Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909291.1_cds_XP_016459517.1_53040
CDS Infomation

[gene=LOC107783065] [db_xref=GeneID:107783065] [protein=protein HESO1-like] [protein_id=XP_016459517.1] [location=join(79997..80015,80222..80316,80364..80478,82058..82242,83353..83448,85605..85650,92521..92627,92752..92853,92929..93741)] [gbkey=CDS]
Sequence

ATGGTTTTATCTTTGGAAGTTCTGCGTGAGAAAGCACAGCAGCGTGAACAGAAGCAGCGG
AACAAATATGCAACCTTAGAACAATTATCGGCATTTGAAGAATTACTTTATGAGAGATNC
AGTGACTTGGATTTATCTGTCAACTTCACCAGCAGAAAGGTTAACACTACACGGGAGAAG
AAGATCCAGACTCTGAGGAAATTTGCAAAATTTTTTTATCTACTTCAAAGGAATGGTTTC
GTTTATGGTGTCTATGCAGTTACAACTGCCAGGGTGCCAGTTCTCAAAGTTGTTGACCAA
GGAACTGAAATTGAATGTGATATATCAGTTGAAAACTGGGATGGGATATCAAAATCAAAG
ATGATTTACATGATTGGTGCCATTGATGAACGTTTTCGGAAATTGAGCTTCTTGATGAAA
GCATGGGCAAAAGCACAAAATATTAACAGTGCAAAGGATCAAACATTGAATTCTTTATCT
ATAATACTTTTGGTTGCTTTCCATTTGCAGACACGAAATCCTCCCATTCTGCCTCCATTT
TCCGCTTTATTCAGAGATGGTAATGAGCCAGTGGCAGTGGAGAGGTCTCTGTGTAAGTTT
ACGAACTATGGAATAAACAATAAAGAATCAGTGGCTGAGCTCTTGGTTTCTCTATTAAAC
AAGTTACTATCAGTTGAGAAACTTTGGTCCAGAGGTTTGTGTGCCAGTACATTTCAAGGA
TCTTGGATATCTAAAACATGGGGTTCTAGAGTAGGCCATATTAATGTTGAAGATTTCGCT
GATCGATCTCAAAATGTCGCTAGGGCTGTAGGAGAAGAAGAAGTTAAAAGAATCTATAGC
TGCATCCAGCTTTCAGTCCAACACATTTTTGATTTTTCAAATAAAAAGATTGGAGGGAAC
TCTTTAAGGGAGTTCCTATTTGGCCGAGATGCAGCCTCCAGGCTAGACAGCGGTGACACA
GTAAGAAATATTGCAAAAAATATACAAGCTTGTGCTTCTGGAAAAAAAGAGGTGCAATCT
GTTGAACGTTCAATATGCAATAAAAAAACTGTACATGTTGATGCTATCATGACCAAAAGC
ATGTCATCTGTGGAAAGTCCGGGGTGGATACCACAAGGAAAACGGAAACTTTTGGGGCCA
ACTGACTCTTCCTTGACAAAGAGAAGTCAAACAGATGATTGTTTGGGGGGCACCTCTTCT
GGGTTGTCAGGAAGACAGCCAGGAAAAGGGTTATCCAGGCAAGAGCAGCCGATGCCTCAC
TATTTGACAAATAGGTGGGAACCAGTGGTAAACCCAGGAATGATGTCAAGAGAAGGCATG
CACAATAAATTGCCACCTGTTTCATTTGAACCTGCCCATGGAAAAATCATATTAGCAGAA
CCCTTTGGAGAAGTGCATGGTAGGGAGATAATTAGACACCCAAATGTGATTGCGCCAGCT
GTTCCTCATTCCAGTCCCCTTATAGGTAGTCAAATGTCTTATGAGCCGTTCAGATTTCCT
CTTGGTTATTCTAATTCGGGTTGTGATTCTATGCATTCCTCTGCATATTTTTTGCCCCCA
GACCCGAGGAGGTTTTGA

Peptide Sequence

PEP ID

XP_016459517.1
PEP Infomation

PREDICTED: protein HESO1-like [Nicotiana tabacum]
Sequence

MVLSLEVLREKAQQREQKQRNKYATLEQLSAFEELLYERXSDLDLSVNFTSRKVNTTREK
KIQTLRKFAKFFYLLQRNGFVYGVYAVTTARVPVLKVVDQGTEIECDISVENWDGISKSK
MIYMIGAIDERFRKLSFLMKAWAKAQNINSAKDQTLNSLSIILLVAFHLQTRNPPILPPF
SALFRDGNEPVAVERSLCKFTNYGINNKESVAELLVSLLNKLLSVEKLWSRGLCASTFQG
SWISKTWGSRVGHINVEDFADRSQNVARAVGEEEVKRIYSCIQLSVQHIFDFSNKKIGGN
SLREFLFGRDAASRLDSGDTVRNIAKNIQACASGKKEVQSVERSICNKKTVHVDAIMTKS
MSSVESPGWIPQGKRKLLGPTDSSLTKRSQTDDCLGGTSSGLSGRQPGKGLSRQEQPMPH
YLTNRWEPVVNPGMMSREGMHNKLPPVSFEPAHGKIILAEPFGEVHGREIIRHPNVIAPA
VPHSSPLIGSQMSYEPFRFPLGYSNSGCDSMHSSAYFLPPDPRRF

Transcript Sequence

Gene sequence data has not been registered.